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An overview of graph databases and their applications in the biomedical domain

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dc.contributor.authorTimón Reina, Santiago
dc.contributor.authorRincón Zamorano, Mariano
dc.contributor.authorMartínez Tomás, Rafael
dc.date.accessioned2024-05-20T11:42:34Z
dc.date.available2024-05-20T11:42:34Z
dc.date.issued2021-05-18
dc.description.abstractOver the past couple of decades, the explosion of densely interconnected data has stimulated the research, development and adoption of graph database technologies. From early graph models to more recent native graph databases, the landscape of implementations has evolved to cover enterprise-ready requirements. Because of the interconnected nature of its data, the biomedical domain has been one of the early adopters of graph databases, enabling more natural representation models and better data integration workflows, exploration and analysis facilities. In this work, we survey the literature to explore the evolution, performance and how the most recent graph database solutions are applied in the biomedical domain, compiling a great variety of use cases. With this evidence, we conclude that the available graph database management systems are fit to support data-intensive, integrative applications, targeted at both basic research and exploratory tasks closer to the clinic.en
dc.description.versionversión publicada
dc.identifier.doihttp://doi.org/10.1093/database/baab026
dc.identifier.issn1758-0463
dc.identifier.urihttps://hdl.handle.net/20.500.14468/12449
dc.journal.titleThe Journal of Biological Databases and Curation
dc.journal.volume2021
dc.language.isoen
dc.publisherOxford University Press
dc.relation.centerE.T.S. de Ingeniería Informática
dc.relation.departmentInteligencia Artificial
dc.rightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/deed.es
dc.titleAn overview of graph databases and their applications in the biomedical domaines
dc.typejournal articleen
dc.typeartículoes
dspace.entity.typePublication
relation.isAuthorOfPublication06a389cc-435e-4713-a8d7-8350f08ea1a8
relation.isAuthorOfPublicationc87ba267-e907-4b5f-ad5f-319c1cb3d3cd
relation.isAuthorOfPublication.latestForDiscovery06a389cc-435e-4713-a8d7-8350f08ea1a8
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