An overview of graph databases and their applications in the biomedical domain

Timón-Reina, Santiago, Rincón, Mariano y Martínez Tomás, Rafael . (2021) An overview of graph databases and their applications in the biomedical domain. The Journal of Biological Databases and Curation

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Título An overview of graph databases and their applications in the biomedical domain
Autor(es) Timón-Reina, Santiago
Rincón, Mariano
Martínez Tomás, Rafael
Materia(s) Ingeniería Informática
Abstract Over the past couple of decades, the explosion of densely interconnected data has stimulated the research, development and adoption of graph database technologies. From early graph models to more recent native graph databases, the landscape of implementations has evolved to cover enterprise-ready requirements. Because of the interconnected nature of its data, the biomedical domain has been one of the early adopters of graph databases, enabling more natural representation models and better data integration workflows, exploration and analysis facilities. In this work, we survey the literature to explore the evolution, performance and how the most recent graph database solutions are applied in the biomedical domain, compiling a great variety of use cases. With this evidence, we conclude that the available graph database management systems are fit to support data-intensive, integrative applications, targeted at both basic research and exploratory tasks closer to the clinic.
Editor(es) Oxford University Press
Fecha 2021-05-18
Formato application/pdf
Identificador bibliuned:95-Rmartinez-0004
http://e-spacio.uned.es/fez/view/bibliuned:95-Rmartinez-0004
DOI - identifier 10.1093/database/baab026
ISSN - identifier 1758-0463
Nombre de la revista The Journal of Biological Databases and Curation
Número de Volumen 2021
Publicado en la Revista The Journal of Biological Databases and Curation
Idioma eng
Versión de la publicación publishedVersion
Tipo de recurso Article
Derechos de acceso y licencia http://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
Tipo de acceso Acceso abierto
Notas adicionales The registered version of this article, first published in The Journal of Biological Databases and Curation, is available online at the publisher's website:Oxford University Press https://doi.org/10.1093/database/baab026
Notas adicionales La versión registrada de este artículo, publicado por primera vez en The Journal of Biological Databases and Curation, está disponible en línea en el sitio web del editor: Oxford University Press https://doi.org/10.1093/database/baab026

 
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Creado: Fri, 26 Jan 2024, 23:56:57 CET